96 constexpr aa10li() noexcept = default;
196inline namespace literals
212constexpr aa10li operator""_aa10li(
char const c)
noexcept
233 for (
size_t i = 0; i < n; ++i)
234 r[i].assign_char(s[i]);
Provides seqan3::aminoacid_alphabet.
Provides seqan3::aminoacid_base.
The reduced Li amino acid alphabet.
Definition aa10li.hpp:80
friend base_t
Befriend seqan3::aminoacid_base.
Definition aa10li.hpp:86
static constexpr std::array< rank_type, 256 > char_to_rank_table
The lookup table used in char_to_rank.
Definition aa10li.hpp:127
static constexpr rank_type char_to_rank(char_type const chr)
Returns the rank representation of character.
Definition aa10li.hpp:112
static constexpr char_type rank_to_char(rank_type const rank)
Returns the character representation of rank.
Definition aa10li.hpp:119
constexpr aa10li() noexcept=default
Defaulted.
static constexpr char_type rank_to_char_table[alphabet_size]
The lookup table used in rank_to_char.
Definition aa10li.hpp:109
constexpr derived_type & assign_char(char_type const chr) noexcept
Assign from a character, implicitly converts invalid characters.
Definition alphabet_base.hpp:160
static constexpr detail::min_viable_uint_t< size > alphabet_size
The size of the alphabet, i.e. the number of different values it can take.
Definition alphabet_base.hpp:196
rank_type rank
The value of the alphabet letter is stored as the rank.
Definition alphabet_base.hpp:258
A CRTP-base that refines seqan3::alphabet_base and is used by the amino acids.
Definition aminoacid_base.hpp:29
alphabet_base< aa10li, size, char > base_t
Type of the base class.
Definition aminoacid_base.hpp:32
The main SeqAn3 namespace.
Definition aligned_sequence_concept.hpp:26
constexpr char_type to_lower(char_type const c) noexcept
Converts 'A'-'Z' to 'a'-'z' respectively; other characters are returned as is.
Definition transform.hpp:80